BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028G05LP1|AL428956
(848 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1555 1681 0.0
>3x_Contig1555
Length = 10828
Score = 1681 bits (848), Expect = 0.0
Identities = 848/848 (100%)
Strand = Plus / Minus
Query: 1 gatccatgtatttagtgaaatcatcaccatcaaataaaggaacagagcacctggataaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6724 gatccatgtatttagtgaaatcatcaccatcaaataaaggaacagagcacctggataaca 6665
Query: 61 attgagggcatttgaaatctgtgttcaagtagcaaacgacgtagcgaaaattaaatgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6664 attgagggcatttgaaatctgtgttcaagtagcaaacgacgtagcgaaaattaaatgaac 6605
Query: 121 gttgtgtcaaggtgcaaagtgtactctttggaccaatttacaagtccataccagtataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6604 gttgtgtcaaggtgcaaagtgtactctttggaccaatttacaagtccataccagtataca 6545
Query: 181 tgcgaagtcaacggtaagaaatgtaccaggattcacgtcgtacaggaatctctgcgagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6544 tgcgaagtcaacggtaagaaatgtaccaggattcacgtcgtacaggaatctctgcgagga 6485
Query: 241 aacggtaaaacaagaaccatagtgaacacagtgcgcgaacaatgtgaggggaacggacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6484 aacggtaaaacaagaaccatagtgaacacagtgcgcgaacaatgtgaggggaacggacta 6425
Query: 301 atcttgaacatttcttcgatgccccggaacgaccacaacgacaatgacttgctcgaaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6424 atcttgaacatttcttcgatgccccggaacgaccacaacgacaatgacttgctcgaaaca 6365
Query: 361 tacccggaattccaacagactaatctttccatgcttcagttcgattcctttattcaattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6364 tacccggaattccaacagactaatctttccatgcttcagttcgattcctttattcaattt 6305
Query: 421 atgtctcaattatgtacagatcccgtgaccgcattgtctagatgccaaccgcagaattcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6304 atgtctcaattatgtacagatcccgtgaccgcattgtctagatgccaaccgcagaattcg 6245
Query: 481 gaaacgtctacatcgaagcagttggcatgggtcctcattgataatttgtcgcacttatcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6244 gaaacgtctacatcgaagcagttggcatgggtcctcattgataatttgtcgcacttatcc 6185
Query: 541 atggaccccaaattcgacgccaagttgctcaacagatcaattagactcgtacaacagact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6184 atggaccccaaattcgacgccaagttgctcaacagatcaattagactcgtacaacagact 6125
Query: 601 ttcggttctgtcgttatctctacaagtttgcccttatcgttccatggtggtatagaaagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6124 ttcggttctgtcgttatctctacaagtttgcccttatcgttccatggtggtatagaaagc 6065
Query: 661 acgtttaaacatcaatcaacaaaatgtgcaagtggtgaccgtctgttaccctatttcaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6064 acgtttaaacatcaatcaacaaaatgtgcaagtggtgaccgtctgttaccctatttcaat 6005
Query: 721 gaatccgacattatcctataagctctacaaaacgctgtgctagaaaccgtgttgccctac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6004 gaatccgacattatcctataagctctacaaaacgctgtgctagaaaccgtgttgccctac 5945
Query: 781 tatgtgatcttctcatctctgcatggcaaaaggacatggttctgtctacaccaaacaatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5944 tatgtgatcttctcatctctgcatggcaaaaggacatggttctgtctacaccaaacaatt 5885
Query: 841 tttttttt 848
||||||||
Sbjct: 5884 tttttttt 5877
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5827
Number of Sequences: 1807
Number of extensions: 5827
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 848
length of database: 10,358,551
effective HSP length: 16
effective length of query: 832
effective length of database: 10,329,639
effective search space: 8594259648
effective search space used: 8594259648
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)